Article Alerts: Selected Staff Publications

The data show the plastome of Degranvillea is the most reduced of those sequenced among the orchid subfamily Orchidoideae, and is one of the most reduced across the entire family. This study demonstrates the importance of herbarium collections in comparative genomics of poorly known species of conservation concern.

(American Journal of Botany, July 11, 2024
NYBG Contact: Matthew Pace)

Botany Article

Morphological analyses were based on preserved specimen collections, including fruit collections. Floral parts were rehydrated from dried specimens as necessary.

(KEW Bulletin, July 1, 2024
NYBG Contact: Fabian Michelangeli)

Springer Article

This paper makes necessary taxonomic and nomenclatural adjustments before publication of accounts of Apocynaceae (Asclepiadoideae, Periplocoideae, Secamonoideae) for the Floras of Thailand, Peninsular Malaysia, and Cambodia, Laos and Vietnam. It includes the publication of two new species, Gymnemopsis krabiensis and Gymnemopsis thailandica; new country records of Dolichopetalum kwangsiense, Dischidia antennifera, Gongreos curtisii and Vincetoxicum cissoides for Thailand and of Gongronema napalense for both Thailand and Myanmar; two new combinations in Gongreos; 10 new combinations and four new names in Secamone; three new combinations in Stephanotis; one new combination in Pseudosarcolobus; and 11 typifications.

(Thai Forest Bulletin, January 18, 2024
NYBG Contact: Kate Armstrong)

TFB Article

The presence of female gametangia in N. obtusa would have major impact on the management of its invasive behavior. Female gametangia, also known as oogonia, are reproductive structures in which the oospore is wrapped in five spiral cells. Fertilized oospores (zygotes) of characean green algae have been documented to be desiccation resistant and can remain viable after passing through the digestive tracts of waterfowl. The presence of these oospores would increase the dispersal potential of N. obtusa in North America and have enormous negative implications for water resource managers seeking to curb introductions to additional water bodies.

(Botany, January 16, 2024
NYBG Contact: Kenneth Karol)

Botany Article

The inconvenient time gap between the first specimen collection at the field, and the completed description of new species does not outpace the current progression of biodiversity loss. It is important to establish more efficient methods for identifying new species of trees in the neotropics. Historically, there are a plethora of factors that inhibit the rapid documentation and study of plants in the region. For example, international political instability may affect the safety and movement of people and plants, or restrict access to certain regions, or make it financially infeasible to proceed. It is often geopolitical turmoil that has slowed botanical exploration in the neotropics (or the world) throughout history, and we cannot continue in complacency with a lack of efficiency in documentation methods, as we continue to ebb within complex social, environmental, and geopolitical issues.

(Plants People Planet, January 9, 2024
NYBG Contact: Fabian Michelangeli)

PPP Article

Alexa duckeana, differs from A. grandiflora most notably by lacking extrafloral glands and by having shorter pedicels and shorter racemes with more congested flowers. Alexa duckeana occurs only in the southeastern region of Pará, in northern Brazil. Alexa duckeana flowers during the southeastern Amazonian dry season, from August until November. The fruit bodies emerge at the end of the dry season in September until the beginning of the rainy season in April. A. duckeana has an Endangered conservation status, as it only occurs in four known locations. We project a continuous decline in A. duckeana due to threats present in its habitat, such as frequent fires, cattle grazing, and agricultural activities. The species does not occur in any protected areas.

(Phytotaxa, December 7, 2023
NYBG Contact: Benjamin Torke)

Phytotaxa Article

We present the genome of the living fossil, Wollemia nobilis. The Wollemi pine is critically endangered with less than 60 wild adults and threatened by intensifying bushfires in the Blue Mountains of Australia. The genome of Wollemia provides insight into the earliest seed plants, while enabling conservation efforts. Its genome is among the most contiguous large plant genomes assembled, with extremely low heterozygosity and unusual abundance of DNA transposons. A transposon is a class of genetic elements that can “jump” to different locations within a genome. Small RNA and methylome sequencing reveal a conservation of ancient silencing mechanisms, where certain defense genes are suppressed or expressed as an adaptation or effect of a change in the environment. Wollemia is susceptible to Phytophthora, and a suite of defense genes are targeted for silencing in leaves. Phytophthora is a genus of plant-damaging oomycetes (water molds).

(bioRxiv, August 24, 2023
NYBG Contact: Barbara Ambrose)

bioRxiv Article

The anatomy of the neck cells and the structure of the archegonium during the central cell growth is a stage in
development of the archegonium that occurs before fertilization is described and compared for Ceratozamia tenuis and Zamia furfuracea. Two neck cells are reported for both species with anatomical features that suggest they participate in the fertilization process. Although it has been hypothesized that the stage is characterized by a cytoplasm with lots of vacuoles, from which a large central vacuole becomes prominent, there are no significant differences between the development and structure of archegonial neck complexes in the two species studied.

(Flora, May 16, 2023
NYBG Contact: Dennis Stevenson)

Flora Article

A synopsis of the genus Meriania in Peru is presented here, where 36 species are recognized, 25 of which are endemic. This synopsis includes a key to the genera in the tribe Merianieae, a key to the recognized Meriania species for Peru, illustrations, comments on affinities, distribution and phenology, and nomenclatural notes. Twenty-four species were found in northern Peru, which holds the highest species richness in Peru. Most species have restricted distributions, and only four species (M. neilli, M. radula, M. sanguinea and M. tomentosa) occur in more than five regions. The Peruvian species of Meriania grow mainly in the eastern flanks of the Andes in premontane forests, montane forests, elfin forests and subparamos at 350–3500 m, but two species (M. escalerensis and M. microflora) grow in the sub-Andean cordilleras.

(Phytotaxa, July 11, 2023
NYBG Contact: Fabian Michelangeli)

Phytotaxa Abstract

Rarely exiting the holes and crevices in which they hide, they stay put until the last quarter of the moons of October and November (and sometimes December), when every palolo worm in Polynesia and eastern Melanesia splits in half. In Vanuatu’s Mota Island in the northern Banks group, the appearance of the palolo sets a wide mark on the seasons. The cool season on Mota is marked by the appearance of rara (genus Erythrina) flowers, and that same flower’s fall is the signal that the palolo worm will soon surface. Following the fading of the rara, three months are named after the worm, and each palolo swarm signals the current developmental stage of the yam (Dioscorea spp.) crop.

(Ethnobotany Letters, May 5, 2023
NYBG Contact: Mike Balick)

Ethnobotany Letters Abstract

Feral crops are resilient in that they are left to compete with pests and weeds on their own. They likely contain genes that can tolerate or defend against biotic and abiotic stressors. However, feral plants may also behave as weeds in competition with domesticated crops. Few species of feral crops have been thoroughly studied, among these are feral rice and Brassicas. However, the lack of collaboration between researchers and scholars has created a lack of uniform cross-citation, and scholarly communication is limited. For example, the distinct emphases on applied research such as weed control studied by agronomists and on fundamental evolutionary research by evolutionary biologists may result in different terminology for the same things, and data that is useful and complementary, but kept separated. We brought together 23 experts on the topic of feral crops to chart the future of this field and explore opportunities to improve food security.

(Plants People Planet, March 10, 2023
NYBG Contact: Alex McAlvay)

PPP Article

“Calendar plants” are a widely utilized element in southern Vanuatu, important for weather forecasting and other time-reckoning purposes. In the case of disaster readiness, one species of yam, Dioscorea alata, is grown because its strong vines survive cyclone-force winds. Since other crops may be badly damaged, people have identified emergency foods, such as the endemic palm species Caryota ophiopellis. This plant grows deep in undisturbed forests, and in times of disaster, the inner tissues of its trunk can be used to produce a starchy food (similar to the sago palm), which can replace staple root crops and be stored for weeks. The people of Aneityum and Tanna have also identified trees and shrubs which they can use to prevent coastal erosion; Bruguiera gymnorhiza, a mangrove species found on Aneityum, is locally protected because of its ability to stop big waves, and the native shrub Scaevola taccada is planted along the coast to protect from storms.

(Journal of Ethnobiology, January 3, 2023
NYBG Contact: Mike Balick)

BioOne Article

The Chin people are one of the founding groups of the Union of Myanmar. The communities we interviewed used a total of 32 plant species for textile dyeing from 29 genera in 24 families. Chromolaena odorata, Lithocarpus fenestratus, and L. pachyphyllus were the most important dye species. The main colors used for traditional Chin clothing are black, green, and red. One common response described dyes that were red in color. It is produced from leaves derived from tree species collected from the wild. The trees are also used for firewood ash, it functions as a mordant to fix the dye to the fabrics. One of the threats to this traditional plant knowledge is the increasing destruction of plant habitats by shifting cultivation and subsistence farming. These practices have reduced the availability of local textile dye plants. The study of traditional textile dyeing will help re-establish the use of natural dyes, encourage the cultural integrity of the indigenous people, and serve as an example for other communities to preserve their traditional knowledge of plant textile dyes.

(Ethnobotany, December 2, 2022
NYBG Contact: Kate Armstrong)

MDPI Article

Four new species of Harringtonia associated with beetles from Belize and Florida, USA are documented. Harringtonia is the fungal genus that hosts the causal agent of laurel wilt. Arthropods were among the first animals to colonize and exploit terrestrial ecosystems roughly 480 million years ago. Trees have evolved mechanisms to defend themselves against insects and fungi, mainly by producing specialized chemicals, resins and latexes. Only a few of the fungus-carrying beetle lineages are able to colonize living, healthy trees in their natural habitat. Several of these beetles and fungi have become invasive species by colonizing naïve trees which have not evolved defenses against these unusual pathogens, such as the avocado tree. Many trees within the Lauraceae family are food crops. Understanding these fungi is crucial to developing strategies to mitigate potential exotic pest fungal species and their effects on plant foods and ecosystems.

(Journal of Fungi, June 8, 2022
NYBG Contact: Joao Araujo)

J Fungi Article

Modern classifications of Ormosia are not grounded on well-substantiated phylogenetic hypotheses and have been limited to just portions of the geographical range of the genus. Here, we present the most comprehensively sampled molecular phylogeny of Ormosia to date, based on analysis of both nuclear and plastid DNA sequences from 82 species of the genus. We reject the hypothesis that the inter-hemispheric disjunction in Ormosia resulted from fragmentation of a more continuous “Boreotropical” distribution. The lack of an evolutionarily based foundation for systematic studies has hindered taxonomic work on the genus and prevented the testing of biogeographical hypotheses related to the origin of the Old World/New World disjunction and the individual dispersal histories within both areas.

(Science Direct, October 19, 2021
NYBG Contact: Benjamin Torke)

Science Direct Article

A new cost-effective method has been developed to uncover and understand the way in which Nitellopsis obtusa had moved across landscapes. These methods and analyses are applicable to invasive and native plant and algae species, and allow for efficient genotyping of diverse quality samples, including 100-year-old herbarium specimens. The data generated by this new method indicates that Starry Stonewort was introduced into North America from Western Europe. A single nucleotide transversion in the plastid genome separates a group of five samples from Michigan and Wisconsin that either resulted from introductions of two closely related genotypes or a mutation that had occurred in the invasive range.

(Springer, July 16, 2021
NYBG Contact: Kenneth Karol)

Springer Article

By digitizing herbaria this problem and several others can be averted, and the information becomes accessible to a broader audience. Herbaria around the world contain specimens that can be over 100 years old and many specimens old and new are unidentified. In many herbariums there is a lack of staff and expertise to identify these new species. The Half-Earth dataset is the largest most diverse dataset of herbarium specimen images to date. Here we present the results of the 2021 Fine-Grained Visual Categorization competition. The best computer models created were able to identify a plant species 85% of the time.

(Frontiers, February 1, 2022
NYBG Contact: Damon Little)

Frontiers Article

A modern taxonomic treatment of Ceratozamia is presented. Based on fieldwork combined with very detailed study of herbarium specimens from and in Mexico and Central America, detailed morphological descriptions of the 36 species of Ceratozamia are provided. This new revision includes a dichotomous key for identification of all species, and is based on and incorporates the previous morphological, molecular, and biogeographic data published for Ceratozamia. Explorations in Mexico during the past three decades have uncovered new species of Ceratozamia, rapidly increasing its known diversity. This monograph is an invaluable tool in today’s era of habitat destruction and illegal collecting. It will allow for proper species identification that will lead to informed conservation assessments and actions.

(PhytoKeys, September 21, 2022
NYBG Contact: Dennis Stevenson)

PytoKeys Article

Analysis of the Ceratopteris richardii fern has brought us closer to understanding why ferns retain more DNA than other plants. Normally, excessive gene baggage is discarded by other lifeforms as evolution takes place, and they keep the genome that is most helpful and metabolically easier to maintain. Homosporous ferns have been doing the opposite. Researchers have found that Ceratopteris has been accumulating genetic debris over millions of years, and there is an unexpected diversity within the genome. The unveiling of these large genomes has also revealed that ferns have acquired the genes that enable them to produce anti-herbivore toxins from bacteria. It remains unclear how organisms who are millions of years apart have managed to influence the genetic makeup of these homosporous ferns.

(Nature Plants, September 1, 2022
NYBG Contact: Barbara Ambrose)

Nature Plants Article

Rynchospora stiletto is generally found in the Ozark Highlands, Interior Plateau, and Ridge and Valley ecoregions of the southeastern U.S.A. It is unique among other species of Rhynchospora by its distinct combination of 1-flowererd spikelets, dark brown scales, and relatively wide fruits. Rynchospora (Cyperaceae) comprises a group of 13 species. Knowledge of phylogeny of Rynchospora is still incomplete. After extensive field work and study to reveal the exact locations of R. stiletto, it remains unclear how many populations had been lost prior to documentation. Six out of seven populations grow in a protected area, though R. stiletto is still at risk of being outcompeted by species with higher nutrient requirements and shade tolerance, particularly where soil and hydrological disturbances have occurred, or will in the future.

(Kew Bulletin, August 16, 2022
NYBG Contact: Robert Naczi)

Springer Article

Allelopathic activity in plants can be an indication that the chemicals utilized might also be effective in identifying antileukemic compounds that might someday serve as medical therapies. Working with a large group of investigators from the United States and Ecuador, plant extracts were screened for their ability to inhibit or interfere with the development of other plants. A thin-layer chromatography bioautography assay was used to identify a number of antileukemic compounds in the extracts. This approach can easily be implemented in areas of the world with high biodiversity but with less access to advanced facilities and biological assays. These kinds of initial studies are only the beginning of a long and laborious search for effective compounds that might someday be considered for clinical use. Plants will continue to play a major role in the development of new pharmaceutical medicines.

(Molecules, May 4, 2022
NYBG Contact: Mike Balick)

Molecules Article

The lichen currently assumed to be the holotype of Alectoria fallacina was mistakenly placed in the holotype packet by Josef Motyka after the description, while the actual holotype lichen was likely kept in his personal herbarium. This unusual scenario is supported by other cases from the literature pertaining to the types of names published by this author. Based on the fact that the currently accepted holotype of A. fallacina directly conflicts with the protologue, and that all evidence suggests it could not have been derived from the type locality, and conflicts with the known working methods of both the collector (Gunnar Degelius) as well as the describing author (Motyka), the holotype of A. fallacina is treated as effectively lost. Lectotypification preserves the application name of this endangered species, and provides a case study in addressing issues in typification for the multitude of names published by Josef Motyka in the Parmeliaceae. The production of a unique unidentified fatty acid as the main secondary metabolite is what chemically separates A. fallacina from its congeners.

(Taxon, April 25, 2022
NYBG Contact: James Lendemer)

TAXON Abstract

Lack of research can lead to a lack of diversity in Ethiopian farming variety faba beans. Seventeen farmers’ varieties of faba had been identified through phenotypic descriptors, and hundreds of structured and semi-structured interviews were conducted across five agroecological zones and cultural areas to understand the local cultural knowledge and reasoning behind farmers and the faba beans they choose to grow. Results reveal that traditional varieties were distributed amongst family members, whereas new varieties were acquired only through local markets. Understanding the diversity of the farming varieties of faba beans will expand the use of the already multipurposed legume.

(Taylor & Francis, April 14, 2022
NYBG Contact: Alex McAlvay)

T&F Abstract

Several decades of interdisciplinary research have created a paradigm shift in our perception of symbioses. This change in perspective has led to the discovery of the originally underappreciated and overlooked dynamism of fungal mutualisms such as mycorrhizae. Lichens are another example of important fungal mutualisms where reconceptualization is needed in order to realize their potential as model systems. An objective synthesis of data and envisioning a new integrative approach will unify the spectrum of ecology and evolution. With this newly proposed ten-theme framework, lichens can become the vanguard of symbiotic theory.

(Trends in Ecology & Evolution, April 6, 2022
NYBG Contact: James Lendemer)

TE&E Article

Nine new species of Meriania (Melastomataceae, Merianieae) are described and illustrated, and M. zunacensis, originally from Ecuador, is recorded for the first time in Peru. Among the new species, following IUCN criteria, M. megaphylla is categorized as Data Deficient (DD) as it is only known from one collection made in 1914, M. bicentenaria and M. sumatika are categorized as Endangered (EN), and the remaining new species are categorized as Critically Endangered (CR). With these discoveries, Northern Peru now has a total of 34 species of Meriania and is the country with the second highest diversity for the genus. Despite these breakthroughs, there are still many undescribed species, mainly due to the poor exploration and collection in some highly diverse regions.

(Willdenowia, March 3, 2022
NYBG Contact: Fabian Michelangeli)

https://bioone.org/journals/willdenowia/volume-52/issue-1/wi.52.52103/Nine-new-species-and-a-new-country-record-for-Meriania/10.3372/wi.52.52103.full

Although the European pharmacopeia considers the species interchangeable, recent studies have demonstrated two chemically distinct species that should not be treated as the same species. Further, the sale of H. zeyheri as an herbal supplement is not legal in the United States. The authors used DNA barcoding to distinguish H. procumbens from H. zeyheri in herbal supplements. Among the 20 fully-analyzable supplements, H. procumbens was not detected in 75%; 25% contained both H. procumbens and H. zeyheri; and none contained only H. procumbens. The authors recommend a novel mini-barcode region as a standard method of quality control in the manufacture of devil’s claw supplements.

(MDPI, September 24, 2021
NYBG Contact: Damon Little)

MDPI Article

Studies carried out to date suggest that GSLs may have a role in the adaptation of plants to different environments, but direct evidence is lacking. The authors grew two kale populations divergently selected for high and low indol-3-ylmethylGSL (IM) content (H-IM and L-IM, respectively) in different environments and analyzed agronomic parameters, GSL profiles and metabolomic profile. They found a significant increase in fresh and dry foliar weight in H-IM kale populations compared to L-IM in addition to a greater accumulation of total GSLs, indole GSLs and, specifically, IM and 1-methoxyindol-3-ylmethylGSL (1MeOIM). Metabolomic analysis revealed a significant different concentration of 44 metabolites in H-IM kale populations compared to L-IM. The authors suggest that H-IM kale populations could be more tolerant to diverse environmental conditions, possibly due to GSLs and the associated metabolites with predicted antioxidant potential.

(Metabolites, June 14, 2021
NYBG Contact: Alex McAlvay)

Metabolites Article

With the increased digitization of herbaria worldwide and the advances in the fine–grained classification domain that can facilitate automatic identification of herbarium specimens, there are a lot of opportunities for supporting research in this field. However, existing datasets are either too small, or not diverse enough, in terms of represented taxa, geographic distribution or host institutions. Furthermore,aggregating multiple datasets is difficult as taxa exist under a multitude of different names and the taxonomy re-quires alignment to a common reference. We present the Herbarium Half–Earth dataset, the largest and most diverse dataset of herbarium specimens to date for automatic taxon recognition.

(arXiV, May 28, 2021
NYBG Contacts: Damon Little, Barbara Ambrose)

arXiV Article

This team of researchers, led by NYBG Graduate Student Laura Boggess, presents a review of vegetation-focused climbing-impact studies. They compare study design and climbing-specific considerations in 19 studies and report the impact of rock climbing on richness and abundance of lichens, bryophytes, and vascular plants. They then propose a set of best practices to guide design of future studies.

This review reveals that existing studies have employed widely differing methods for data collection and analysis. The effects of climbing on vegetation also varied among studies. Standardizing methods, such as pairing climbed and unclimbed transects or including a metric for climbing use, will generate more reliable and useful conclusions about the effect of climbing on vegetation. Climbing will increasingly disturb cliff ecosystems. The authors’ proposed best practices for climbing study methods are one way to produce more accurate information to inform climbing management plans, ultimately enhancing cliff conservation.

(Applied Vegetation Science, April 2021
NYBG Contact: Laura Boggess)

Applied Vegetation Science Abstract

Here, the authors combine phylogenetic and distributional data for 138 species of the Neotropical plant tribe Merianieae (Melastomataceae) with pollinator observations of 11 species and field pollination experiments of six species to test whether the mountain environment may indeed drive such shifts. The authors demonstrate that shifts from bee to vertebrate pollination coincide with occurrence at high elevations, and they show that vertebrates are highly efficient pollinators even under the harsh environmental conditions of tropical mountains, whereas bee pollination efficiency lowers significantly as reflected in flower visitation rates. Furthermore, the authors show that pollinator shifts in Merianieae coincide with the final phases of the Andean uplift and were contingent on adaptive floral trait changes to alternative rewards and mechanisms facilitating pollen dispersal. These results provide evidence that abiotic environmental conditions (i.e,. mountain climate) may indeed reduce the efficiency of a plant clade’s ancestral pollinator group and correlate with shifts to more efficient new pollinators.

(New Phytologist, April 2021
NYBG Contact: Fabian Michelangeli)

New Phytologist Article

The book bridges the gap between theory and practice and underscores the urgent need for expanded and rigorous scientific research as medical cannabis is increasingly legalized. Chapters are both evidence-based and practical, weaving in learning objectives, review questions, and case examples, all of which will prepare students and professionals for the reality of working with medical cannabis consumers.

*One chapter in the book, Cannabis Ethnomedicine (Balick & Dahmer), explores the historical and cultural context of cannabis and addresses contemporary medicinal uses.

(Understanding Medical Cannabis, January 2021
NYBG Contact: Michael Balick)

Taylor & Francis book information

The observational data were gathered during field expeditions and from herbaria collections. These data were then plotted onto a phylogeny developed for the Melastomataceae in a previous study. Vivipary is reported in six species belonging to three genera and three tribes of Melastomataceae. These species have convergent characters, such as an herbaceous habit and capsular fruits, and inhabit similar ecological niches in shaded tropical rain forest floors. This record of convergent vivipary distributed among different lineages could elicit discussions regarding the role of the phenomenon in the distribution of individuals within populations as well as contribute to the knowledge of vivipary in flowering plants.

(International Journal of Plant Sciences, January, 2021
NYBG Contact: Fabian Michelangeli)

IJPS Abstract

Thousands of cycads are on display at botanic gardens worldwide, and many have been kept alive for centuries. Unfortunately, information about their provenance is unknown or has been lost over time. By retracing wild origins (provenance) of cycads in botanical collections, we can realize their untapped value for use in restoration and recovery work, addressing international conservation targets.

(People, Plants, Planet, December 19, 2020
NYBG Contact: Dennis Stevenson)

PPP Abstract

Herbarium is a fascinating enquiry into this unique field of plant biology, exploring how herbaria emerged and have changed over time, who promoted and contributed to them, and why they remain such an important source of data for their new role: understanding how the world’s flora is changing. Barbara Thiers, director of the William and Lynda Steere Herbarium at the New York Botanical Garden, also explains how recent innovations that allow us to see things at both the molecular level and on a global scale can be applied to herbaria specimens, helping us address some of the most critical problems facing the world today.

At its heart, Herbarium is a compelling reminder of one of humanity’s better impulses: to save things—not just for ourselves, but for generations to come.

(Timber Press, December 8, 2020
NYBG Contact: Barbara Thiers)

NYBG Shop Book information: Herbarium

NYBG Press Release

In Defense of Plants Podcast

This edition, developed as a textbook for ethnobotany classes as well as the lay public, discusses the botanical wisdom of indigenous peoples. The authors argue that the very roots of human culture are deeply intertwined with plants, and that conservation goals can be best achieved by learning from indigenous peoples and their beliefs. The book is written in an engaging style understandable to all, with first-hand stories of fieldwork, spectacular illustrations and a deep respect for cultural diversity and the earth’s natural heritage. Recently, the American Botanical Council in Austin Texas hosted a virtual book launch event, with anthropologist and sustainability specialist Ann Armbrecht moderating a conversation with Drs. Balick and Cox that can be viewed here.

(CRC Press, September, 2020
NYBG Contact: Michael Balick)

NYBG Shop: People, plants, and culture